sarahdada

Straglr conversion support to json for MAVIS annotation

5

Hello! I am using Straglr (https://github.com/bcgsc/straglr) for analysis long-read sequencing tandem repeats. The output of the tool is .tsv and .bed . I wanted to annotate the .tsv. The .bed...

Question: blacklist map location

1

Hello! Just trying to publish something using the code: delly cnv -g hg38_no_alt.fa \ -m Homo_sapiens.GRCh38.dna.primary_assembly.fa.r101.s501.blacklist.gz chr15.bam The issue is that I cannot find the blacklist online, can't remember where...