santiago-es

Hi, thanks for adding this data to CBIO portal. I noticed some of the studies above had classified TERTp but had not posted the data in portal. I had spent...

I get the error with this file as well, but here is the file I am trying to do this on: (sending gdrive link because file too large to attach...

Also just to be precise, the error specifically says "[abpoa_gen_cons] No enough sequences to perform msa."

I think the issue might once again be with compilation if it works on your machine... I re-downloaded the TideHunter repo (git clone --recursive) and the updated abPOA within it...

Ok, thanks! The larger file was produced by using zcat to combine several smaller fq.he files like so Zcat *fastq.gz > newFile.fq.gz Hope that is helpful! Santiago On Mar 1,...

Thanks for the bug push. I've re downloaded and compiled (successfully, with no alternations) the repo on my Ubuntu 20.x distro and TideHunter now successfully runs for the individual fastq...

The Mcf10a file is a merged fastq.gz of 12 fq.gz files with the same barcode. The other Merged file is 2.1 Gb. Both produce the same error on my machine....