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                                            Arthur Sangil Lee

calls to os.getcwd() causes errors in Windows

I don't know, but this issue looks like it's still open? I've since then moved onto just using a linux installation

fmriprep trying to create folder that ends with a dot in its name in Windows?

I see. Yes, indeed I was using the default output space. I'll try explicit specification and see if that resolves the issue.

fmriprep trying to create folder that ends with a dot in its name in Windows?

So, specifying the output space explicitly helped get over that particular error. This is the command I used: fmriprep-docker M:/FacePlace/BIDS M:/FacePlace/derivatives participant -w M:/ZZ_bench/workdir --fs-no-reconall --fs-license-file C:/FreeSurfer/license.txt --output-spaces MNI152NLin2009cAsym:res-2 --nthreads...