sequencescape

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**Describe the bug** Upload of invalid CSVs for sample manifests can result in CSV::MalformedCSVError. Eg. ``` A CSV::MalformedCSVError occurred in sample_manifest_upload_with_tag_sequences#create: Invalid byte sequence in UTF-8 in line 26. app/sample_manifest_excel/sample_manifest_excel/upload/data.rb:90:in...

JamesGlover

Y24-052 [BUG] Dropdown list dependencies

1

**Describe the bug** Sequencescape has two 'edit' pages for Studies - the standard one, and one for admins. The standard one has logic that restricts the available values in one...

KatyTaylor

Closes #4076 #### Changes proposed in this pull request Add server-side validation to enforce correct relationship between data release 'strategy' and 'timing' fields - add 'validates' methods on study metadata...

KatyTaylor

Y24-028 Targeted NanoSeq - added filters on polymetadata resource

1

Allows selection of request metadata on the Limber side See related Limber branch https://github.com/sanger/limber/pull/1668

andrewsparkes

DPL-1105 [BUG] A study set to never release should not require accession numbers for the samples

3

**Describe the bug** I (ec20) have a study set to never release, therefore it shouldn’t require accession numbers for the samples. However, when I try to generate the sequencing request,...

yoldas

Automatic update via https://github.com/sanger/sequencescape/blob/develop/.github/workflows/update_rubocop.yml This cop will trigger safe-autocorrect for new cops, and will add inline rubocop:todo for other cops. Please sanity check any changes before merging in.

github-actions[bot]

**Describe the Housekeeping** The word 'asset' is used throughout Sequencescape and is confusing / non-intuitive as it refers to a historical concept in the product. Task: Research an approach to...

KatyTaylor

🚨 [security] [js] Update vite 5.1.5 → 5.1.7 (patch)

1

🚨 Your current dependencies have known security vulnerabilities 🚨 This dependency update fixes known security vulnerabilities. Please see the details below and assess their impact carefully. We recommend to merge...

depfu[bot]

Bump vite from 5.1.5 to 5.1.7

1

Bumps [vite](https://github.com/vitejs/vite/tree/HEAD/packages/vite) from 5.1.5 to 5.1.7. Changelog Sourced from vite's changelog. 5.1.7 (2024-03-24) fix: fs.deny with globs with directories (#16250) (5a056dd), closes #16250 5.1.6 (2024-03-11) chore(deps): update all non-major dependencies...

dependabot[bot]

[ruby] Update ruby-units 4.0.2 → 4.0.3 (patch)

1

Here is everything you need to know about this update. Please take a good look at what changed and the test results before merging this pull request. ### What changed?...

depfu[bot]