Roary
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error message: No module named 'matplotlib' in roary_plots.py
Hi
I am trying to use roary_plots.py to visualize my phylogenetic tree, so I run the command following, however, there is an error saying: No module named 'matplotlib' . Does anyone have any suggestion how to solve this issue.
Your help will be really appreciated.
(agro) KluepfelLabMBP01:results dklabuser$ python roary_plots.py
usage: roary_plots.py [-h] [--labels] [--format {png,tiff,pdf,svg}]
[-N SKIPPED_COLUMNS] [--version]
tree spreadsheet
roary_plots.py: error: the following arguments are required: tree, spreadsheet
(agro) KluepfelLabMBP01:results dklabuser$ python ./roary_plots.py --labels accessory_binary_genes.fa.newick gene_presence_absence.csv
Traceback (most recent call last):
File "./roary_plots.py", line 64, in
Thanks a lot. Best,
Limin