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Published 20 hours ago • verified publisher icon sanger-pathogens

Ambiguous nucleotides treated literally by sequence_trim

Open ChrisHIV opened this issue 6 years ago • 0 comments

Ambiguous nucleotides are treated literally by sequence_trim. e.g. specifying AAAN to be trimmed will trim "AAAN" from sequence ends, but not "AAAA", "AAAC" etc. which is probably fair enough, but might warrant a warning message to the terminal in case the user is expecting ambiguity codes to be interpreted.

ChrisHIV avatar Mar 06 '18 16:03 ChrisHIV