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artemis is not working

Open fengyuchengdu opened this issue 2 years ago • 0 comments

Starting Artemis with arguments: -mx10g -ms2g -noverify --add-opens=java.base/java.lang=ALL-UNNAMED --add-opens=java.base/java.util=ALL-UNNAMED -Djdbc.drivers=org.postgresql.Driver -Dartemis.environment=UNIX
Exception in thread "AWT-EventQueue-0" java.lang.InternalError: java.lang.reflect.InvocationTargetException at java.desktop/sun.font.FontManagerFactory$1.run(FontManagerFactory.java:86) at java.base/java.security.AccessController.doPrivileged(Native Method) at java.desktop/sun.font.FontManagerFactory.getInstance(FontManagerFactory.java:74) at java.desktop/sun.font.SunFontManager.getInstance(SunFontManager.java:247) at java.desktop/sun.font.FontDesignMetrics.getMetrics(FontDesignMetrics.java:265) at java.desktop/sun.swing.SwingUtilities2.getFontMetrics(SwingUtilities2.java:1231) at java.desktop/javax.swing.JComponent.getFontMetrics(JComponent.java:1646) at java.desktop/javax.swing.plaf.basic.BasicGraphicsUtils.getPreferredButtonSize(BasicGraphicsUtils.java:351) at java.desktop/javax.swing.plaf.basic.BasicButtonUI.getPreferredSize(BasicButtonUI.java:474) at java.desktop/javax.swing.JComponent.getPreferredSize(JComponent.java:1680) at java.desktop/java.awt.FlowLayout.preferredLayoutSize(FlowLayout.java:414) at java.desktop/java.awt.Container.preferredSize(Container.java:1823) at java.desktop/java.awt.Container.getPreferredSize(Container.java:1807) at java.desktop/javax.swing.JComponent.getPreferredSize(JComponent.java:1682) at java.desktop/java.awt.BorderLayout.preferredLayoutSize(BorderLayout.java:734) at java.desktop/java.awt.Container.preferredSize(Container.java:1823) at java.desktop/java.awt.Container.getPreferredSize(Container.java:1807) at java.desktop/javax.swing.JComponent.getPreferredSize(JComponent.java:1682) at java.desktop/javax.swing.JRootPane$RootLayout.preferredLayoutSize(JRootPane.java:866) at java.desktop/java.awt.Container.preferredSize(Container.java:1823) at java.desktop/java.awt.Container.getPreferredSize(Container.java:1807) at java.desktop/javax.swing.JComponent.getPreferredSize(JComponent.java:1682) at java.desktop/java.awt.BorderLayout.preferredLayoutSize(BorderLayout.java:724) at java.desktop/java.awt.Container.preferredSize(Container.java:1823) at java.desktop/java.awt.Container.getPreferredSize(Container.java:1807) at java.desktop/java.awt.Window.pack(Window.java:826) at uk.ac.sanger.artemis.components.FileViewer.(FileViewer.java:265) at uk.ac.sanger.artemis.components.FileViewer.(FileViewer.java:122) at uk.ac.sanger.artemis.components.FileViewer.(FileViewer.java:115) at uk.ac.sanger.artemis.components.LogViewer$1.(LogViewer.java:92) at uk.ac.sanger.artemis.components.LogViewer.maybeMakeViewer(LogViewer.java:91) at uk.ac.sanger.artemis.components.LogViewer.log(LogViewer.java:61) at uk.ac.sanger.artemis.components.Splash.initLogger(Splash.java:252) at uk.ac.sanger.artemis.components.Splash.(Splash.java:147) at uk.ac.sanger.artemis.components.Splash.(Splash.java:173) at uk.ac.sanger.artemis.components.ArtemisMain.(ArtemisMain.java:78) at uk.ac.sanger.artemis.components.ArtemisMain$10.run(ArtemisMain.java:793) at java.desktop/java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:313) at java.desktop/java.awt.EventQueue.dispatchEventImpl(EventQueue.java:770) at java.desktop/java.awt.EventQueue$4.run(EventQueue.java:721) at java.desktop/java.awt.EventQueue$4.run(EventQueue.java:715) at java.base/java.security.AccessController.doPrivileged(Native Method) at java.base/java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:85) at java.desktop/java.awt.EventQueue.dispatchEvent(EventQueue.java:740) at java.desktop/java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:203) at java.desktop/java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:124) at java.desktop/java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:113) at java.desktop/java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:109) at java.desktop/java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101) at java.desktop/java.awt.EventDispatchThread.run(EventDispatchThread.java:90) Caused by: java.lang.reflect.InvocationTargetException at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:490) at java.desktop/sun.font.FontManagerFactory$1.run(FontManagerFactory.java:84) ... 49 more Caused by: java.lang.NullPointerException at java.desktop/sun.awt.FontConfiguration.getVersion(FontConfiguration.java:1262) at java.desktop/sun.awt.FontConfiguration.readFontConfigFile(FontConfiguration.java:225) at java.desktop/sun.awt.FontConfiguration.init(FontConfiguration.java:107) at java.desktop/sun.awt.X11FontManager.createFontConfiguration(X11FontManager.java:719) at java.desktop/sun.font.SunFontManager$2.run(SunFontManager.java:367) at java.base/java.security.AccessController.doPrivileged(Native Method) at java.desktop/sun.font.SunFontManager.(SunFontManager.java:312) at java.desktop/sun.awt.FcFontManager.(FcFontManager.java:35) at java.desktop/sun.awt.X11FontManager.(X11FontManager.java:56) ... 54 more

openjdk 11.0.1 2018-10-16 LTS OpenJDK Runtime Environment Zulu11.2+3 (build 11.0.1+13-LTS) OpenJDK 64-Bit Server VM Zulu11.2+3 (build 11.0.1+13-LTS, mixed mode)

artemis installed via conda (the latest one)

could anyone tell me what went wrong? it used to work few weeks ago (maybe before conda upgrading)

many thanks

fengyuchengdu avatar Apr 18 '22 03:04 fengyuchengdu