Samuel J. Pearce

Another issue (perhaps not specific to veterinary breakpoints but maybe where most of the problem lies) is that many breakpoints are not actually interpretable at this time. CLSI breakpoints are...

No worries, hopefully WHONET are on it! I'm not sure I explained the minimum breakpoints well. There is a lot of controversy (in the UK at least) about the new...

There's also another odd change with the 2024 breakpoints that may affect the package weirdly. For some reason, they have included sensitive dose dependent (SDD) breakpoints as separate to intermediate...

> Ah, I think I see now. Then maybe it's worth it to implement something that checks for less-than-or-equals (`

Finally taking a look at this. Thanks for adding NI as a factor. Just so I understand fully, there is no way that AST results will be interpreted as `NI`...

This issue for staph/strep also seems to be related to the uti issue. For the second line: `as.sir(minimal_example_data[49, ], guideline = "CLSI", breakpoint_type = "animal", host = "host"))` There is...

Just to add to this UTI substitution problem. Clindamycin with Staph. pseudintermedius is a good example where there are only canine breakpoints for soft tissue sites. In theory it should...

Will be coming back to this in the next few weeks so will take a look. Thanks again for your work on this!

So it's better, although the output log is a little confusing and it's quite confusing to get my head around where it is going wrong. To summarise my thoughts on...

Just noticed that I think my second point is related to #163