Sam Ireland

I'd also find this very useful - it's not clear how to replicate the behaviour shown in that screenshot.

I just tried installing CD-HIT again on my Mac, and this time it worked fine. It is a different Mac now, so I'm not sure if that's the cause, or...

Ah, that's a shame! Does that mean that the equivalent atoms are literally the same object in memory? For my particular problem, is there a way to draw lines between...

Molstar looks great - is that intended to ultimately be the successor to NGL? The Cylinder solution worked perfectly thanks. I'm just having trouble zooming to a particular location using...

I am also having this problem. If you install graphene_django to be able to access this, you get a `django.core.exceptions.ImproperlyConfigured` error because there is no django app running.

There currently isn't an option to do this. This tool uses praw to access reddit, and there [is a way to use praw with a proxy](https://praw.readthedocs.io/en/stable/getting_started/configuration.html#using-an-http-or-https-proxy-with-praw), so it would be...

It should be the same command - `save.py saved /path/to/folder` to get saved content for example.

I have thought about Dockerising atomium, which would bundle it with all its dependencies, though probably wouldn't solve your problem. I don't use Windows much these days, but I do...

Thanks for pointing this out, I hadn't even realised. This will be fixed in atomium v2.0, released in a few weeks.

Hi, thanks for flagging this. I think my most recent commit should fix this. If you clone branch 1.0.4, can you confirm this new version of atomium produces PDBs that...