samgregoire

n/p ratio clarification

1

I made a `scpModelWorkflow()` modeling of a small `SingleCellExperiment` object (I only have 20 cells). The `scpModelFilterPlot()` looks like this:  I'm not surprised that I only have a few...

`runCol` argument in `readQFeatures()`

1

Hello, I have an issue / question regarding the `runCol` argument from the `readQFeatures()` function. My sample annotations are stored in a `data.frame` called `meta`. The column containing the name...

Spectrum not found when parsing sage results

3

Hello. I'm trying to use PeptideShaker to process identification files obtained by SearchGUI using several search engines (Comet, OMSSA, Tide, X! Tandem and Sage). PeptideShaker encounters the following error when...