Sameet Mehta

icon location New Haven, CT icon location I am a bioinformatics scientist. I currently work as Bioinformatics Scientist at Yale Center for Genome Analysis. I write end-to-end pipelines.

Results 3 issues of Sameet Mehta

Update normalize.R

The `getSignalsFromList` function has a sanity check, that is not working. It might be worthwhile to make it into a internal `for` loop or a `lapply` to check if the...

`nucpos` files are empty

2 comment

Hi, I did the following: 1. Ran `bwa mem` for the alignment. 2. Used `macs2` to call peaks (`broad` peaks). 3. Used the `NucleoATAC` pipeline as given in the help...

Getting keyword argument error

**Describe the bug** Getting `TypeError: Base.__init__() got an unexpected keyword argument 'mds_solver'. **To Reproduce** The `tmp_data` object was obtained using `GetAssayData(sce, assay = "SCT", layer = "scale.data")` in `Suerat 5.0`....

bug