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salilab
The Integrative Modeling Platform
- Support .cu files in src. - add IMP_HAS_CUDA macro. - add needed workaround files somewhere. They do not need to be installed, so can just be in the include...
That should make return vectors of ref counted things much faster. http://www.boost.org/doc/libs/1_54_0/doc/html/move/implementing_movable_classes.html
To move closer to allowing executables to be run without setup_environment.py as that doesn't play nicely with various ways you want to run things (eg xcode).
In addition, they should check whatever we decide regarding optimized attributes.
Probably best to have something like the swig dependency script that computes them all in parallel. Can be done up front. It can be pretty dumb too. ctest can be...
Tests that read a file, write it back and then diff the content to make sure we process everything we should be processing.
That looks like the other clustering methods.
Method to save coordinates and derivatives of model. Method to reload coordinates. evaluate and then compare derivatives with saved ones.