sahil seth

Did this get resolved? I am trying to use firebase pkg from [here](https://firebase.john-coene.com/articles/flow.html), it does not solve this issue.

Would be great if you could share. firebase package works quite well, but securing the entire app has been tricky https://firebase.john-coene.com/articles/flow.html ``` ui = uiOutput("app") server

This has been partially addressed in: https://github.com/sahilseth/flowr/commit/1178a34534346f0d93977343485d9c2227f46333 https://github.com/sahilseth/flowr/commit/0e67fea5df481104cb52a8c8579019d0a13b6c0f https://github.com/sahilseth/flowr/commit/7c51b75a6c4806fc8bd52d5e0a9f48973b22461a

Sorry I missed this issue earlier. It is assuming you have a queue named short, if you don't it fails. Could you try this: customize this file and supply it:...

I am facing a similar issue, were there any insights from this example? I have 3 cases where titan selects a very low purity solution. However, VAFs suggest a higher...

 This one has a KRAS mutation with AF=0.3  Estimated purity from titan in this case, is 2.5%, however, by including CNV+SSM in phylowgs the purity comes out to...

One issue was, that I was using python3. I fixed a few syntax of a few lines, to make them python 3 compatible (will send a pull request). I now...

Hi Zeev, It seems to work well for bwa mem bams, but not star aligned (RNA seq) bams. These are MD Anderson internal samples - don't have permission to share......

Wish they were cell lines and not patient samples - IRB restriction. If I see the same error with other samples, will contact you. One a side note, I was...