Sachin Kadyan

New entries in obsolete.dat will throw up errors.

15

```python Traceback (most recent call last): File "/ocean/projects/bio210060p/kadyan/openfold-release/scripts/precompute_te mplate_hits.py", line 224, in main(args, template_pipeline_runner) File "/ocean/projects/bio210060p/kadyan/openfold-release/scripts/precompute_te mplate_hits.py", line 116, in main feature_dict = template_pipeline_runner.run(a3m_dir, fasta_file_path) File "/ocean/projects/bio210060p/kadyan/openfold-release/scripts/precompute_te mplate_hits.py", line 80,...

- Added a `PreembeddingEmbedder` for embedding single-sequence (NUM_RESIDUE, ...) shaped embeddings as input.

Stochastic Illegal Memory Access error mid-epoch on AWS p4d instances

7

### 🐛 Describe the bug While training on a large cluster of AWS p4d instances with PyTorch, PyTorch Lightning, and DeepSpeed, we observe an IllegalMemoryAccess error that happens stochastically at...