Ralf Stephan

filtering items with deprecated claims

2

Applying the command `bzcat latest-all.json.bz2 |wikibase-dump-filter --simplify --claim 'P698' |jq '[.id,.claims.P698,.claims.P921]' -c >PMID.ndjson` results in >30M lines like this: ``` ["Q94880466",["19484558"],null] ["Q17485067",["21609473"],["Q18123741","Q12156","Q193430"]] ``` where the first case is an item...

translation: QS ---> wikibase-edit JSON

7

QuickStatements commands can be translated to JSON that is fed to the `wd ee --batch` (or create-entity) commaand by the user. Some commands may need an automated SPARQL query before...

URL: https://osm.wikidata.link/candidates/relation/1433091 Traceback (most recent call last): File "/usr/lib/python3/dist-packages/flask/app.py", line 2292, in wsgi_app response = self.full_dispatch_request() File "/usr/lib/python3/dist-packages/flask/app.py", line 1815, in full_dispatch_request rv = self.handle_user_exception(e) File "/usr/lib/python3/dist-packages/flask/app.py", line 1718, in...

however see this code in JCPAApplet.java ``` // the newly opened file should nicely fit the screen theJcpp.getRenderPanel().setFitToScreen(true); theJcpp.getRenderPanel().update(theJcpp.getRenderPanel().getGraphics()); // ..enable zooming by removing constraint again theJcpp.getRenderPanel().setFitToScreen(false); ```

that is according to our molecule definition

Depending on the SMILES encoding, rendrering of some polycycles may be wrong. 1. Try molecule O1CC2C(C(CC23)C=C3)COS1 : rendering not ok; 2. If you try another encoding of the same molecule,...

do we need a separate package?

1. place ethane (no explicit Hs) 2. click H button 3. click one of ethane's Cs (must be wrong, cannot confirm)

CDKException with manual input of SMILES of a salt

1

https://sourceforge.net/apps/trac/jchempaint/ticket/113 However, the same [NH4+].CP(=O)(O)CCC(N)C(=O)[O-] in a MOL file is displayed as usual. This is NOT considered a CDK problem and should be fixed in JCP.