Renan Valieris

hello there, great idea ! I tried using this with code-server: https://github.com/coder/code-server which already have a `--socket` option, but it gives me a 500 error on launch : `[W 2022-06-03...

thanks I will look into the ruby bindings. as for the proposed API, I guess the most similar to ruby would be using a context manager: https://docs.python.org/3/reference/datamodel.html#context-managers although, if you...

> it could be nice to request a join on the current thread when the kernel spec manager is destroyed yes thats a good point, so calling .join in `__del__`...

CI failed on this import: ``` tests/test_runner.py:14: in from jupyter_client.blocking.client import Empty E ImportError: cannot import name 'Empty' from 'jupyter_client.blocking.client' ($PREFIX/lib/python3.8/site-packages/jupyter_client/blocking/client.py) ``` `jupyter_client.blocking.client` doesnt have `Empty` anymore, however this import...

alright, I did a simple test, disclaimer tho: I never used conda on windows. heres what I did: 1. installed miniconda3 on a win10 vm 2. created a jupyter env...

hello, please give me more details, command line, error messages, SRA ids you tried, etc.

looks like you are using sratools version 2.8.0, you need to update to a more recent version. I tested with sratools 2.11.0 and it worked.

with the env activated, try: `conda install 'sra-tools>=2.11.0'`

this is a dbGap controlled file, you need permisson to download it . if you already have the access setup, you need to go inside the directory configured in vdb-config...

I see, try to run this command to see what happens: `sra-stat --meta --quick /mnt/d/HYJ/dbGap/sra/SRR15652839.sra` this should return a table with the number of reads/spot, parallel-fastq-dump uses this to know...