roblanf

Yeah, that answers the question. I think it's kind of a neat approach. From my perspective, I'm not totally sure about plotting things out over the course of a run...

Hi there, just weighing in here because we're also considering using npscarf to scaffold a long-read assembly from CANU. Here's one reason I think it might be useful: CANU is...

This looks cool. Happy to leave this to you guys, since I'll be focussing on the v2 release for the next few weeks. My suggestion is that you guys coordinate...

just made a couple of small edits, but that should be it for now... On 22 November 2016 at 16:37, Brett Calcott [email protected] wrote: > Okay -- will do. Try...

And I won't update the manual again for at least a couple of weeks - hopefully that will give us time to make the transition to the md manual, and...

Hi there, For general help, please use the google group. Rob On Tue, 24 Mar 2020 at 21:13, aberaslop wrote: > Dear Partitionfinder team, > > I have run a...

I don't pretend to understand in detail what is happening here, but the link to the 'old' solution above contains a workaround that invovles locking threads. We lock threads on...

One (minor) issue with the os.system solution above is that it puts a lot of files in the directory that has the alignment / .cfg file. @brettc, assuming this solution...

I used the first 20 datablocks of [this dataset](https://github.com/roblanf/BenchmarkAlignments/tree/master/datasets/Fong_2012) for a comparison (it's the dataset we used in the PF2 paper, but in that paper we used all datablocks which...

I should probably open a separate issue about the 'zombie' threads. On re-reading patrice's email, that might be the main issue here... but until I do, @brettc do you think...