DrRoHardt

icon indicating a website link winter-lab.org icon indicating an email [email protected]

icon company IBMB - University of Bonn icon location Germany icon location Molecular biologist/biochemist focusing on mass spectrometry-based proteomics incl. machine handling, sample preparation and data analysis.

Results 5 comments of DrRoHardt

Does MM do not notify the user when it is finished?

Perfect. Thanks.

Add PTM-localization score to peptide output

I wonder if such an feature has been added by now? Would be super helpful, because I am usually filtering for high localization score peptides in our phosphopeptde analyses.

Add PTM-localization score to peptide output

PhosphoRS would be cool. But as far as I know PhosphoRS has been extended to other ptmS and is called ptmRS now (https://omictools.com/ptmrs-tool). At least within ProteomeDiscoverer from Thermo that’s...

Add PTM-localization score to peptide output

https://ms.imp.ac.at/index.php?action=ptmrs > Am 24.06.2020 um 21:29 schrieb Lei Lu : > > > For high res data, we could add 'PhosphoRS score' instead of A score. They are very similar...

Add PTM-localization score to peptide output

Another option would be ptmProphet which is part of philosopher: https://philosopher.nesvilab.org > Am 24.06.2020 um 21:29 schrieb Lei Lu : > > > For high res data, we could add...