Rob Knight

Results 35 comments of Rob Knight

Thanks for the positive feedback! On Aug 3, 2013, at 5:01 PM, "morganx" wrote: The ipython notebook format for STAMPS2013 was very easy to use. I think it is a...

Remember it assumes that the samples are homogeneous. Likely the samples are not homogeneous, but the heterogeneity comes from one of the many technical biases that can cause samples to...

Note that the cytoscape devs are in our building so it might be worth more detailed engagement to do something that’s cutting edge now vs what we did in 2008…...

That would be really awesome! Certainly worth adding. On Mar 9, 2015, at 12:45 PM, mortonjt wrote: I was actually thinking that it should be part of the graphical interface...

Well, another thing that would be really cool that requires the same ability would be the highly desirable task of re-trigerring pcoa with just the selected samples so it's worth...

Ideally matched but systematically shifted eg lighter and less saturated. On Jul 22, 2015, at 5:55 PM, Yoshiki Vázquez Baeza [email protected] wrote: Often times the colors used for the spheres...

Right, and it is important that visibility and color can be controlled orthogonally for interactive analysis. Rob On Oct 31, 2013, at 11:55 AM, Yoshiki Vázquez Baeza wrote: This is...

yeah this would be great! On Dec 16, 2013, at 2:18 PM, Yoshiki Vázquez Baeza wrote: [https://github.global.ssl.fastly.net/images/icons/emoji/+1.png] — Reply to this email directly or view it on GitHubhttps://github.com/qiime/emperor/issues/231#issuecomment-30701675.

It would be useful in cases where you want to see the overall pattern rather than be distracted by details of the individual traces. So there’s a clear motivation to...

We could just look at the ones that were new clusters (i.e. don't have gg ids because they failed ref picking), right? On Aug 8, 2012, at 11:27 AM, jrrideout...