Rob Knight

Is the Microsetta processing currently completely independent of qiita? If yes, is that a feature or a bug? > On Mar 31, 2021, at 1:19 PM, Daniel McDonald ***@***.***> wrote:...

If adding to emperor, it might be worth considering how to export the new categories from emperor so that they can be used for all the other analyses in qiime/qiita...

Ideal. On Mar 9, 2015, at 7:08 PM, Greg Caporaso wrote: So maybe this should be Study contacts, and be have a mutli-select option (if we can include two, we'll...

Note that environmental package should not be at the study level because many studies now contain samples from multiple types of environment (eg soil plus water or human plus dog...

As long as they don't have to fill all the fields for all the samples which is often impossible... On Nov 19, 2014, at 9:54 AM, josenavas wrote: Thanks @rob-knighthttps://github.com/rob-knight...

Correct (although one person should be listed as primary). On Dec 1, 2014, at 12:47 PM, adamrp wrote: As long as we're on the topic... @ackermag mentioned that it would...

Not quite accurate. Faith's PD is alpha diversity in one sample, not a calculated difference between samples. The term asymmetric UniFrac should not be used: although we invented it independently,...

Yes, this is something we have been doing a bunch of in other studies. Will be very useful to have in there generally rather than trawling through specific sets of...

Let's continue here and I will encourage people to participate if I don't see them responding. On Jul 3, 2013, at 8:24 AM, "Greg Caporaso" wrote: Great - let's start...

And on a related topic, is there a way of specifying in the various distance comparison scripts a nested hierarchy of comparisons, eg in Costello et al we did distances...