Riley Grant

icon indicating a website link rileyhgrant.com icon indicating an email [email protected]

icon company @broadinstitute icon location United States of America icon location software engineer @broadinstitute • amateur ultrarunner • pianist

Results 25 issues of Riley Grant

Release browser hail tables

Resolves #1369

Update ClinVar pipeline

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ClinVar is an external data source that aggregates and curates information about the impacts variants have. Their dataset updates frequently, and the gnomAD browser aims to keep the ClinVar information...

Update ClinVar pipeline

Will resolve #1569 Updates the ClinVar pipeline to run based on recent updates to ClinVar. Currently this does not have the updates to our XML, I just got this to...

Add GTEx and Pext to gnomAD v4.1

Resolves: https://github.com/broadinstitute/gnomad-browser-team/issues/69 The pext/gtex integration already exists for gnomAD v2 and exac (the two top level datasets on GRCh37). This PR adds this data for the datasets on GRCh38 (gnomAD...

feat(docs): add information on how to speed up large pipelines

Adds one small paragraph about adding more workers to a dataproc cluster to run the computational portion of the variants pipeline in a shorter timeframe (~2 hours). I had meant...