Riley Grant
Riley Grant
Resolves #1423, Resolves #1442, Resolves #1475 Updates: - **pipelines** - genes pipeline now uses v4.1 constraint data (minor update to one task to not drop a field) - v4 variants...
Currently, if a variant does not have a ClinVar entry, the graphql api request will return an error (variant not found) from the ClinVar portion of the query. Also, the...
As of May 15 2023, GCP's Container Registry is deprecated. Currently, the browser pushes Docker images to the Container Registry as part of the workflow for deployment. Google's recommendation is...
Resolves #1459 Adds small helpers / modifies existing components to optionally log button clicks Adds logging of button clicks of: - Variant co-occurrence tab for table on gene page -...
Resolves #1355 Adds 2 tables to the stats page that display the number of inferred sex sample per genetic ancestry group in v4
CA8 (https://gnomad.broadinstitute.org/gene/ENSG00000178538?dataset=gnomad_r4) cannot be found by searching CA8 directly in the search bar. If one searches for an alternate symbol, such as CALS, CA8 will be brought up and the...
Katie brought to our attention that in EFL1: This long deletion variant exists in genomes only, and can be found by searching for it: https://gnomad.broadinstitute.org/variant/15-82225077-TCCGTGCCCCCCCTACCCACAGCCCAACTGCATCCCACCAAACATACACCATATTCCTAGCCCAGCCCAACTTTCCCCTTTCCCTTA-T?dataset=gnomad_r4 However, it does not show...
Related: #1042 Currently, in order to load data into Elasticsearch, there are a set of pipelines that need to be run that result in the full gnomad dataset being loaded...
To be calculated by production team and added to Stats page after Related: https://github.com/broadinstitute/gnomad_production/issues/1438