conkit
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Package for contact prediction
A ConKit package containing source code for contact prediction written in (scikit-learn)[http://scikit-learn.org/]. Idea is to implement commonly used applications in Python.
Possible first applications could be:
- [ ] PSICOV
- [ ] CCMpred / plmDCA
- [ ] MI
Benefit of such application could be contact prediction without compilation or any other requirements. Major drawback is obvious, we will definitely lose performance.
Alternatively, native integration of the applications could also be an option by shipping them. Other packages do that, i.e. MSAVALVE