Richard Adams

Given a transcript sequence derived from a GeneSequence defined on reverse strand of a chromosomal sequence, the method getCodingSequence doesn't return the reverse complement, but just the reverse. This seems...

Maintenance of ontology module

1

Hi, Been looking at the ontology module as it might be useful in my day job. I tried parsing the latest GO flatfile at http://geneontology.org/docs/download-ontology/#go_basic and the parser handles it...

Improve test coverage - currently 49.5% in bio-java core

6

Test coverage is little low - covering more code would enable - more confident refactoring. In a code-base with contributions over a long period of time there are cases where...

[BUG] Whitespace formatting change forces redeployment of index

3

### What is the bug? Hello, I am attempting to deploy an AWS Bedrock knowledgebase stack using an OpenSearch Serverless backing store. If I deploy the stack first time, it...

Installation problems with call to https://unofficial-builds.nodejs.

1

Hello Great library thank you I am trying to use better-sqlite3 v12 in a node.js webapp, built as Docker container on node-alpine:22 base image. All is fine on local dev...