Robin Gutzen

The points you list would definitely be very helpful. Regarding that, 2. could there be a relation link indicating that within a neo segment an AnalogSignal was created from an...

@pipakin: Had the same problem (as first time user), no tfa, and with your fix it works fine. Thanks!

I think this is still relevant. For example as plotting routine which takes an imagesequence object as input, or maybe also an analogsignal + coordinate information. This may need to...

> Also, the following figures need to be uploaded on the main public repository (i.e. this one), and properly linked in the file `cobrawap/pipeline/README.rst`, instead of pointing at an external...

Thanks for documenting this issue, I also just ran into this problem with snakemake version 8.10.0.

For reference, the corresponding issue in snakemake: https://github.com/snakemake/snakemake/issues/2607

To note, the `|` has a functionality different from the `_` in the profiling hierarchy: ``` # search order: config_some_profile_name|variant.yaml config_some_profile|variant.yaml config_some|variant.yaml config|variant.yaml config_some_profile_name.yaml config_some_profile.yaml config_some.yaml config.yaml ``` The crux...

Have there been updates on this, or can this be closed?

@FMarmoreo could you test whether the output of the updated functions are all equivalent to the previous versions and post the results? Otherwise, a change in behavior would need to...