Roy Granit, PhD

Trouble running the parser from webserver

1

Hi, I'm trying to run this script directly from a web server, I can get it to run some basic options like `--help` but get only empty output when running...

Could you please add support for API key?

1

**Is your feature request related to a problem? Please describe.** Currently one cannot enter the PubMed API key, so one cannot increase the rate limit to 10calls/sec **Describe the solution...

Is there a way to fetch Mesh terms?

1

Is there a way to fetch **MESH terms** of a publication from the API using the packadge? This information is found under `'MeshHeadingList'` of the xml returned using `efetch`.

Does vue-tag-input support synonyms for tag suggestion?

1

Hello, Looks like an amazing piece of software. Can one adapt the code to support synonyms for suggesting keywords? Example selectedTags: [ 'big', 'small' ] list of synonyms: big =...

Hi All, When using the `sq.pl.nhood_enrichment` function we obtain a heatmap with certain scale - what do the values represent? can one obtain statistical significance of the results? Thanks!

**Is your feature request related to a problem? Please describe.** Currently cellxgene supports only h5ad, and if one wants to run it using serverless ifrastructure it is not possible (as...

Typo correction

Function to classify malignant/non-malignant cells

2

Have you considered adding a function that would classify cells into malignant/non-malignant similar to [inferCNA 'findMalignant' function](https://github.com/jlaffy/infercna/blob/master/R/findMalignant.R)?

Can one deploy grobid on AWS lambda?

3

Hi, Does anyone know if it is possible to run this grobid on AWS Lamda? and if so, how much time it takes to load?