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Exclude some biotoolsIDs from id checking
@matuskalas @bgruening @hmenager @joncison Please provide some links to the resources that have biotoolsIDs which cannot be changed, so when I go through and verify the existing biotoolsIDs I can exclude these from the check
Thanks
Bioconda:
- [ ] https://github.com/bioconda/bioconda-recipes/tree/master/recipes
- [ ] https://github.com/matuskalas/bioconda-recipes/tree/add_extra_ids/recipes
Debian:
- [ ] https://blends.debian.org/med/tasks/bio
- [ ] https://blends.debian.org/med/tasks/bio-dev
- [ ] https://blends.debian.org/med/tasks/bio-ngs
- [ ] https://blends.debian.org/med/tasks/bio-phylogeny
- [ ] https://blends.debian.org/med/tasks/cloud
- [ ] https://blends.debian.org/med/tasks/statistics
Galaxy:
- [ ] https://github.com/matuskalas/tools-iuc/tree/edam1_23_biotools_ids/tools
- [ ] @hmenager please add, thanks!
It would also be extremely valuable, in case you'll be greping lists of the biotoolsIDs in those resources, to share those lists (or even scripts) somewhere somehow. Million thanks @hansioan 🥇
@matuskalas I assume your fork of the Bioconda recipes has some extra ids which will eventually get in the main Bioconda recipes.
~~The Debian lists only have HTML websites? No API?~~ (DONE with HTML parsing )
In the repo: https://github.com/matuskalas/tools-iuc/tree/edam1_23_biotools_ids/tools what are the biotoolsIDs? Are the ids the same as the folder names?