reidbm

Results 2 issues of reidbm

When a batch has only one level of a covariate (i.e. group) variable, the common dispersion is used for ALL GENES. Why? Shouldn't the code default to the tagwise dispersion...

The plotMB function is reporting the following error. Any help debugging would be greatly appreciated! > plotMB(results=results,rsid="rs1256930",effect="strong") > Warning messages: > 1: running command 'gswin32c.exe -q -dBATCH -dNOPAUSE -sDEVICE=ps2write -sOutputFile=C:\Users\reidbm\AppData\Local\Temp\RtmpITT4Lb\file146c10e8eb...