Carter Peene

Results 69 comments of Carter Peene

will probably use this https://stackoverflow.com/questions/40105796/turn-warning-off-in-a-cell-jupyter-notebook

Done. Error outputs are turned off at the beginning of notebooks in the `environment setup` cell.

Related issue here to be investigated by Dandihub https://github.com/dandi/dandi-hub/issues/93

@amykglen's suggestion would be very easy to implement in the new graph splitter module; If a query graph has no pinned nodes it would be no problem to just return...

I made those changes listed by @amykglen above, and pushed them to branch `issue1874`. I will enumerate them more specifically here. - I removed a check which would prevent running...

Yes, I think that is correct @edeutsch. Unless we decide otherwise, the meta KGs that are examined and used will be based on the KP endpoints that our instance decides...

I have the logic implemented which fetches each available KP's meta-KG and makes a large super-meta-KG for ARAX, and stores it in a file `meta_kg.json`, in `ARAX/ARAXQuery/Expand`. This logic merges...

To make explicit the caching mechanism that this system currently uses; it piggybacks off of the mechanism that `KPSelector` uses to load the "meta-map". A new `meta-kg.json` is made and...

RTX-KG2's meta-KG contains 57 meta-nodes and 45,2813 meta-edges, as of my last check, making up a significant majority of ARAX's meta-KG. As for time performance, the duration of the rebuilding...

I've added a bit more logic to remove 'null' properties that don' need to exist in the Meta-KG, and to properly assign values to the `knowledge_types` property of meta-edges. After...