cucim
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rapidsai
cuCIM - RAPIDS GPU-accelerated image processing library
As mentioned in https://github.com/rapidsai/cucim/pull/252#issue-1187379516, we should come up with a more solid heuristic for the `choose_conv_method` helper in CuPy to help it more appropriately decide when to use a convolution...
**Describe the bug** In a [recent CI run](https://gpuci.gpuopenanalytics.com/job/rapidsai/job/gpuci/job/cucim/job/prb/job/cucim-gpu-test/CUDA=11.5,GPU_LABEL=driver-495,LINUX_VER=ubuntu20.04,PYTHON=3.9/308/console) there are various warnings related to test folders. For example: ``` 13:14:48 /opt/conda/envs/rapids/conda-bld/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_place/lib/python3.9/site-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: Installing 'cucim.skimage.filters.tests' as data is deprecated, please list...
`hessian_matrix_eigenvalues` has an efficient code path for 2D, but for nD the current implementation is very memory-hungry. In this case it would be beneficial to divide up the eigenvalue computations...
#340 proposed some minor improvements to gradient computation. However, I think there is still potential for a much stronger improvement. Specifically, by creating an custom `ElementwiseKernel`, we could write all...
**Describe the bug** error when importing cucim: ``` Python 3.8.10 (default, Jun 22 2022, 20:18:18) [GCC 9.4.0] on linux Type "help", "copyright", "credits" or "license" for more information. >>> import...
We have a `sobel` filter, but it is only for the common case of first order 3x3 kernels. I had a request to provide an equivalent to OpenCV's Sobel which...
**Is your feature request related to a problem? Please describe.** It would be nice to have a utility function in cuCIM Python module so that OpenCV object can be easily...
**Is your feature request related to a problem? Please describe.** CuImage is currently incompatible with PyTorch's builtin mulitprocessing (specifically with DistributedDataParallel) because it cannot be pickled. **Describe the solution you'd...
## Report needed documentation **Report needed documentation** It would be nice to add Jupyter notebooks that show how to use newly added features. E.g., - [stain normalization](https://github.com/rapidsai/cucim/wiki/release_notes_v22.06.00) (#273) - [batch...
**What is your question?** The notebook provided at https://github.com/rapidsai/cucim/blob/branch-22.08/notebooks/Multi-thread_and_Multi-process_Tests.ipynb provides example for multi-treaded read. I sthis equivalent to batch load of read region as shown in the release note here...
