cucim
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cuCIM - RAPIDS GPU-accelerated image processing library
closes #363 by bumping the minimum required scikit-image attn: @jakirkham, @ajschmidt8
**Describe the bug** Changes made in #276 break use of some thresholding functions if the user does not have scikit-image >= 0.19. We should either bump our minimum requirement to...
Other RAPIDS libraries have been moving to [scikit-build]( https://scikit-build.readthedocs.io/en/latest/ ) for Python packages, this integrates nicely with CMake and can simplify the build process (as well as making other package...
Based on [this user comment]( https://github.com/Pescatore23/tomcat-blender/blob/17819faf8bc521ba881b12b8720e440de233c5ae/01_extract_surfaces.py#L18-L19 ), seems like there may be some interest in a marching cube implementation on GPU.
Would be good to revisit this usage of `--freeze-installed` with `conda` when installing our test dependencies. It is possible this indicates some conflict that may be occurring. _Originally posted by...
In a few cases, we have needed to include kernel code in strings in Python. It would be good to start refactoring this out into separate .cu/.c files that we...
## Report incorrect documentation **Location of incorrect documentation** https://github.com/rapidsai/cucim/blob/e155e320ab4bbe1e37f7d35dbd3870ccd8beed64/python/cucim/src/cucim/skimage/_vendored/_ndimage_interpolation.py#L278-L279 the docstring says `prefilter=True` is not implemented, but seems it's implemented via https://github.com/cupy/cupy/pull/4402 could you please help confirm? cc @grlee77
**Is your feature request related to a problem? Please describe.** We would like to start thinking about supporting [BioFormats](https://www.openmicroscopy.org/bio-formats/). Bioformats is a pathway to access so many formats that we'll...
**Is your feature request related to a problem? Please describe.** We need to look at Next-generation file formats (NGFF) (https://ngff.openmicroscopy.org/latest/) which use [Zarr](https://zarr.readthedocs.io/en/stable/) format for general microscopy images with distributed...
Requesting .ndpi format support for CuImage. Currently, when loading ndpi files I get this: `ValueError: Cannot find a plugin to handle '.../image.ndpi'! ` I found nothing in logs or past...
