qicaibiology

Q: using macs2 to call peaks on eCLIP-seq data get an error

2

Hi: I am trying to analyze eCLIP-seq data and my PI advised me to call peaks using MACS2. I read the manual on how macs2 can be used for peak...

Hi: I have used bedtools to do intersect between bed6 files and the bed I generated from csv. At first I got the following error: `$ awk -F '[,]' 'NR>=2{print...

how to visualize the bedfile from pureclip using IGV

1

What do I need to do to visualize the bed files generated. It looks that when I load it to IGV, and type some genes, I see no peak on...