Patrick

> I'm having issues with a large genome (2.7 Gb) sample, and I think the script might actually be stuck. It's been running for about two weeks now, with no...

> 你是对的，参数可能是这里问题的一部分。`-b` > > 至于运行时，不能说，在运行了数周后，我停止了并使用另一种方法。 Hello, Many thanks for your reply! I have desisted my program. Best regards, Qiao

When I didn't use "-l 0", I got two haplotype files of about the same size. In particular, the heterozygous bases and the number of homozygous bases are very different...

Thank you very much for your help! The samples used for sequencing were derived from selfing. However, currently it is not possible to perform genome survey analysis due to the...

> You'll see a juicer_tools.jar listed under the assets for that release (even though it's in the Juicebox github repo). This is mentioned here: https://github.com/aidenlab/juicer/wiki/Download#version-2xxxx > > If you cloned...