David Chin

Document output values

1

Could the documentation describe the output? Or maybe a heading row in the output. In particular, the second column, the percentage value.

Environment: - Python 3.9.2 - pytz 2021.3 When using `delorean.parse()` this warning message is produced: ``` delorean/dates.py:170: PytzUsageWarning: The normalize method is no longer necessary, as this time zone supports...

Build issue with CUDA 11.2

3

Environment: - RHEL 8.1 - CUDA 11.2 - Open MPI 4.1.0 - Intel icc/icpc 19.1.3 (2020u4) - MKL FFTW - GPU devices: V100-SXM2 - CUDA driver: 460.32.03 Cmake invocation: `cmake...

Add some preprocessor directives in `simd.h` and `ifdef`s to deal with Intel icpc compiler. Intel intrinsic functions for Intel C++ does not have the `::` scope resolution operator.

- OS: RHEL 8.1 - Compiler: icpc 19.1.3.304 (from Intel ComposerXE 2020u4) - with MKL - NCBI Blast: 2.11.0 - CMake: 3.23.1 Compiler errors on intrinsic function names: ``` /ifs/opt/src/diamond/src/dp/swipe/../../basic/../basic/../util/simd.h(73):...

Older Bioperl reports version strings like "1.006002". Newer Bioperl reports version strings like "1.7.8". So, the assumption that the version strings can be cast to floats could be incorrect. Use...

Feature request: Use Conda environment name in prompt. Just like virtualenv name appears in prompt, it would be nice to have the Conda environment name.

Fix format specifier for printf

1

Fixes error in apg.c (line 574) reported by LGTM.

Update code for running under systemd.

Feature request: ngs-python module should build a wheel, rather than an egg.