biomsalign

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MSA result is different from Clustal Omega

3

### Input ``` >test1 AANTTYKNYRENLLT >test2 VTPENYIRNLL >test3 AANTTYKNFREND >test4 ANTTYKNFHRND >test5 ANTTYKNYHRNRL >test6 HTYQNYHQNLL >test7 VTYQNYHQNLL >test8 HTPENYIRNLL >test9 AANTTYKNYRENLD >test10 AANTTYKNYRENLF ``` ### Observed output ``` >test1 AANTTYKNYRENLLT-...

nikolay-alemasov

Non optimal alignment

3

Hi, I have tried to align the sequences: Name,Sequence Seq1,GTGHKL Seq2,GTGHKVL Seq3,GTGPHKL Seq4,GTGPHTHKL Seq5,GTGTAHKL Seq6,GTGAKHKL Seq7,GTGKLHKL Seq8,GTGVVHKL Seq9,GTGHVKL with varying gapopen and gapextend penalties it does not seem to return...

marijnsanders