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Published 20 hours ago • verified publisher icon potulabe
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Port of symphony algorithm of single-cell reference atlas mapping to Python

Symphonypy

pytest workflow

Porting of Symphony R package to Python

  • Installation and usage
  • Benchmarking

Installation and usage

Please visit Read the Docs documentation web page.

Benchmarking

  • Harmony (R) vs Harmonypy benchmarking: benchmarking/Benchmarking_harmony_PBMC_Satija.ipynb
  • Symphony (R) vs Symphonypy benchmarking: benchmarking/Benchmarking_symphony_PBMC.ipynb

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verified publisher icon potulabe

Metadata

Port of symphony algorithm of single-cell reference atlas mapping to Python

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