Samuel Wein
Samuel Wein
Getting this to work consistantly across platforms looks like it's going to require moving the pyopenms building to a pyproject.toml which is out of scope for this specific issue I've...
For what its worth I've tried to replicate this on my development windows box with python 3.11, and I don't get the error. Running the Dependency Walker on the same...
We build the library in multiple chunks (pyopenms_1 - pyopenms_7), and then we have versions for python 3.9, 3.10, and 3.11, so that accounts for the large number of libraries....
> ok so this is a bug that needs to be fixed This should be fixed by https://github.com/OpenMS/OpenMS/pull/7616#pullrequestreview-2356623154 right?
@RalfG does the same happen with ``python -c "import pyopenms; import pandas"``
well, that's spooky. Can you try removing packages from the second environment to try to find which specific package is causing the issue?
Thankfully most of these failed tests were featureXML files from very old tools that we no longer have, so they've been updated to pass. FeatureFinderCentroided has both debug and algorithm:debug...
I'm making a copy of this branch so that we can run the CI on it in the OpenMS repo.
> Can we upload the artifacts even when the build fails for testing? I was hoping that the non-global flags for OpenMP would fix it. Let me see what I...
> Can we upload the artifacts even when the build fails for testing? I was hoping that the non-global flags for OpenMP would fix it. https://github.com/OpenMS/OpenMS/actions/runs/14112054589 should have what you...