Niko Popitsch
Niko Popitsch
Hi, I am currently developing *rnalib*, a python library (https://github.com/popitsch/rnalib) that could be used for the analysis of 4sU datasets. On Github you will also find a (simplified!) SLAM-seq full...
Hi, Sorry, forgot to add the command-line example, but its nothing fancy, just something like ``` STAR --genomeDir ${star_index} \ --sjdbGTFfile ${star_gtf} --outSAMattributes NH HI AS nM MD \ --readFilesCommand...
Just as a followup, I have now commited the PairedEndIterator and extended the SLAM-seq tutorial respectively. This will be in the next build, for now you can install the latest...