pirovc

Skip empty lines when parsing tax. files, as reported here (https://github.com/pirovc/ganon/issues/282)

String identifier for user bins

1

I suggest to have an option to tag user bins with a name/identifier. That would facilitate integration with other tools and downstream analysis. Currently, AFAIK, it accepts in the `raptor...

Performance without numpy

6

Hi @benmaier Thanks for keep improving the package. I noticed you removed numpy in the latest release. Do you know if that will impact the performance of the packing? I...

Using wildcards or params in the wrapper identifier

1

**Snakemake version** 8.6.0 **Describe the bug** From the [documentation](https://snakemake.readthedocs.io/en/stable/snakefiles/modularization.html#wrappers): _"It is possible to refer to wildcards and params in the wrapper identifier, e.g. by specifying "0.0.8/bio/{params.wrapper}" or "0.0.8/bio/{wildcards.wrapper}"."_ However, this...

GTDB metadata cols changed an file is not .tar.gz but .tsv.gz. Thanks for reporting #19.