dicomsort

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Add move option (-m or --move) used for cleaning DICOM file structures. The move option allows directly moving files instead of copying them, saving disk space during the cleaning process....

AliAfs

Skip patient/Series processing if corrupted DICOM cannot be read by pydicom's dcmread()

2

Steve, As we discussed, I think it could be beneficial to have the possibility to skip the processing of a patient/specific Series if one of the DICOM files in the...

denbonte

Assigning unique file names within series

4

It would be helpful if it was possible to automatically assign unique names to the sorted files in the bottom-level directory. InstanceNumber unfortunately is not always present. SOPInstanceUID is too...

fedorov

need to handle character encodings and illegal filename characters

1

Likely most reliable option is map everything to the C Locale and ascii encoding for broadest compatibility with filesystems. Also can search and replace characters like colon, which is invalid...

pieper

meaning of the -z flag

3

Is the goal of -z to run gzip compression on the files when putting them in the target directory?

pieper

confirm source deletion?

1

Can the tool ask for user choice of deleting src files after successful cp operation? The (process) idea is: - user sends data from scanner to tmp location - user...

bebbi

need sample data and self-test

2

Since we expect the program to work on 'normal' dicom files (meaning single frame, without missing tags) we can use arbitrary dicom data for testing. I'll set up a small...

pieper

command line argument option

1

How about the following syntax: dicomsort src_folderroot tgt_folderroot/%tag1_%tag2/%tag3/%tag4_%tag5 So, for example: dicomsort data sorted/%PatientName/%StudyDate/%SeriesDescription-%InstanceUID.dcm would create folders like: sorted/JohnDoe/2013-40-18/FLAIR-2.dcm

pieper