phys2bids
phys2bids copied to clipboard
physiopy
Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart. BrainHack participants, check the issues with the BrainHack labels!
## Detailed Description At the July dev call, @smoia mentioned wanting to add linting with CI on PRs for #402 ## Context / Motivation We want a more consistent code...
During OHBMH @htwangtw showed me [neo](https://github.com/NeuralEnsemble/python-neo/tree/master), a python package that can read a lot of different physiological file formats (see the list [here](https://neo.readthedocs.io/en/stable/io.html#module-neo.io)), like [Spike2](http://ced.co.uk/products/spkovin) as implemented [here](https://github.com/NeuralEnsemble/python-neo/blob/master/neo/rawio/spike2rawio.py). @htwangtw also...
I am the author of BIDScoin, a DICOM to BIDS converter: https://github.com/Donders-Institute/bidscoin ## Goal BIDScoin doesn't convert physiological data but supports plugins and I was wondering how feasible it would...
We've been working for a while on phys2bids v2, but it might be time to move further and get a breaking improvement. For instance, we could simplify and adjust the...
Closes none, depends on #315 This is a draft because I'm not _totally_ sure the workflow is right. ## Proposed Changes - Add a GH Action to create comment addressing...
Long story short, there is the possibility of acquiring physiological files with the MRI scanners. All the Siemens physiological converters I found are not being currently maintained (not a problem),...
I'm opening this discussion because I think that there are several reasons to do this change: 1. Avoid racists and discriminative language implied in the ``master/slave`` words. 2. Since ``main``...
## Detailed Description Currently, there is some information about common setups in the [Best Practices page](https://phys2bids.readthedocs.io/en/latest/bestpractice.html). However, I think it would be very helpful to (1) get more specific about...
@physiopy/all if there is any contributions or contributor we're not recognising, please let me know before this upcoming Sunday so that we can feature it in the ISMRM presentation. You...
ATM, our main objects (Blueprint Input/Output) do not check that all properties (lists) have the same amount of entries. For example, the data could feature only 3 channels, but the...