Pat Gunn
Pat Gunn
I'm not that familiar with fiola; I've heard of it but never used it. Can you start debugging by trying to run the notebooks included with caiman? Knowing if those...
Hello, Caiman itself can use the GPU without needing additional software installs; at most you might need to sidegrade the tensorflow versions using conde. But I see that fiola uses...
Longer-term I think it'd be good to have all initialisers force everything to the exact type expected for whatever's being filled in, rather than whatever the serialisation expects. This will...
Fixed with some past patches, I think.
I'm reminded how ugly (and fragile-looking) that filename-parsing logic is; eventually we'll want to get away from encoding parameters like that in the filename and store them in json or...
Hi, I have time to look at this now, but I'm realising I don't know exactly the process you were using to get this - what notebook/script were you running...
Also, what are the filenames of the hdf5 and mmap files you're trying to load? And what versions of caiman are you using on both the Windows and Linux side?
Sorry for the delay in getting back to you; was out of the country for a scientific conference. What are the filenames you were trying to load, and what versions...
Closing due to inactivity
Right now the tensorflow pinning prevents us from getting a numpy 2.x in a normal environment build. We'll have to look at this again after the diffs land to get...