Alex Petty
Alex Petty
- Update eigen download URL to gitlab - update paths because tarball structure has changed - remove reference to file that doesn't exist in vcftools createBCF2Index I saw that a...
I'm seeing failure on the Validating template stage without the API Keys feature in use. I'd be glad to provide more information to get this resolved, as my team would...
**Describe the bug** When I attempt to use scalene to profile a program that uses [python-isal](https://github.com/pycompression/python-isal) via [xopen](https://github.com/pycompression/xopen), I get an error from an internal import within the python-isal package....
This adds SuSiEx, https://github.com/getian107/SuSiEx, a fine-mapping tool. I could use a hand understanding if this recipe needs openMP libraries in the `host` and `run` section, it seems like other recipes...
Update WFA2-lib to a newer version that will allow vcflib to compile on Mac OS. This fixes https://github.com/vcflib/vcflib/issues/377. The only downside is that this relies on a specific commit on...
**Describe the bug** The currently bundled version of WFA2-lib has a file in its root called VERSION that leads to a build failure on Mac OS, because of the case-insensitive...
Add r-peer, an updated version of the peer package to compile and run in modern environments. At this time, I'm just evaluating how much work it would take to get...
This PR adds support for configurable protocol, ftp, http, or https to ensembl reference data download and vep cache download. I was evaluating snakemake-wrapper and widely used workflows as a...
Fixes https://github.com/r-lib/gargle/issues/283. This is a niche failure, but also a very easy fix.
Hello, Gargle seems to need a function that was added to lifecycle in v0.2.0: https://github.com/r-lib/lifecycle/releases/tag/v0.2.0 , but gargle does not specify a minimum lifecycle version. My group only happened to...