Alex Petty

I have one more thought: it's very likely that in the future, if shapeit does not merge ARM64 compatibility upstream in this repo, different outside packaging groups will start patching...

I'd be glad to add a mac build workflow to github actions, and clean up the make target a bit. I was mostly just validating that this will work until...

OK, I went ahead and simplified the makefile for Mac build, and also tested it on `aarch64-linux-gnu`. I noticed a few things: 1. It doesn't look like libboost_serialization is actually...

I have: 1. Reverted the `-mtune` change entirely. 2. Tested on both an M1 Mac and ubuntu 20.04 environment 3. Added a Github Actions workflow to test on Mac OS,...

I believe this xcftools PR that fixes up its build on Apple Silicon would have to go through before that action will pass, though: https://github.com/odelaneau/xcftools/pull/7 Also, while I was testing...

The build is working on Linux in its current state, I've been testing it. The real blocker at this point to getting this merge ready is the xcftools PR: https://github.com/odelaneau/xcftools/pull/7...

@rwk-unil I've validated that for open-source projects like SHAPEIT5, the 2000 minute limit does not apply. that's only for closed-source projects. I'd love to get this in, I was working...

While I'm here: We also noticed after time that each of these worker processes topped out at 32GB of RAM used exactly. Is this RAM usage configurable? The fact that...

I've run snakefmt, black and the linter over these changes. I believe this to be ready to merge.

@fgvieira I fixed all the tests, and now see that what I had previously done introduced multiple ways to generate the desired output files. I also unintentionally ran black over...