Hu Peiyao issues

Results 3 issues of


                                            Hu Peiyao

After combine two datasets together to recluster, some of the abundance of high-abundant OTUs were reduced dramatically.

I have two datasets A and B, where there is a high-abundance OTU (id: OTU_54) in dataset A. In order to compare the abundance of OTU_54 in the two datasets,...

Could not determine version of tbl2asn - please install version 24.3 or higher

Hi, I installed prokka use git, and when I execute "prokka assembly.fasta --force", I met the problem above. Then I reinstalled the tbl2asn from "https://ftp.ncbi.nlm.nih.gov/asn1-converters/by_program/table2asn/mac.table2asn.gz", and added to the environment...

configs/isolate_mode.info']" finished abnormally, OS return value: -7

For a bacterial genome: sequenced by Illumina, 10Gb size. I conducted the following command: **Command line:** /public/home/software/opt/bio/software/SPAdes/3.15.2//bin/spades.py -o /public/home/pyhu/project/W240603023 -WGS-12ea/D2405270900_0108/240618_SEQ113_DP8480009019BR_L01_SP2406060397/D2405270900_0108-out/spades_assembly -k 27 --threads 32 --isolate -1 /public/home/pyhu/project/W240603023-WGS-12ea/D2405270900_0108/240618_SEQ113_DP84800 09019BR_L01_SP2406060397/DP8480009019BR_L01_266_1.fq.gz -2 /public/home/pyhu/project/W240603023-WGS-12ea/D2405270900_0108/2...