Shreya

KeyError: '2'

1

Hi, I am trying to run spectre for CNV analysis for my targeted cancer data. I am getting the following error. My command line: spectre CNVCaller \ --coverage s101.regions.bed.gz \...

No cnv found in teh vcf

2

Hi I have know cnvs. I am running spectre for my targeted sequenced data for cancer. I am not getting the output what I expected to see. Also I have...

Seperate Log2 ratio

1

Hi, Thank you for the wonderful tool ! I am using CNVkit on targeted sequencing data(Nanopore) for copy number loss/gain of genes. I have known CNVs, for some genes my...