pcamach2
## Description I wanted to set up a Singularity container to run [patch2self ](https://github.com/ShreyasFadnavis/patch2self), so I followed the guidance in this [post](https://shreyasfadnavis.medium.com/patch2self-self-supervised-denoising-via-statistical-independence-4601fda38c20) to install dipy1.4.0.dev0, which includes patch2self. Here is...
_Supports #278_ Adds FastSurfer detection utility incorporated to smriprep.workflows.anatomical.py to fix failure when providing FastSurfer subjects dir as existing Freesurfer subjects dir. This utility `check_fastsurfer` employs a fix of touching...
**Is your feature request related to a problem? Please describe.** No **Describe the solution you'd like** Addition of FastSurfer workflows as an alternative to FreeSurfer. **Describe alternatives you've considered** I...
Corrects typos in the reconstruction page of the docs. Freesurfer requirement for ss3t with hybrid surface-volume segmentation corrected to "Yes", for msmt without ACT corrected to "No". ## Changes proposed...
## Summary A custom reconstruction workflow using a custom atlas seems to complete according to the working directory outputs, but the output is not written to the derivatives folder. ##...
I am testing out a new compute platform and I keep running into the same error in preprocessing in which the workflow stalls during `hstack_confounds`. The slurm job continues to...