Pavlin Poličar
Pavlin Poličar
For some reason, the information being printed out when using the `verbose` flag was outputting to `stderr` and not `stdout`. This makes sense for errors, but not for general information....
I've been trying to get this to work with sparse matrices. The setup: ```python >>> import pynndescent >>> import scipy.sparse as sp >>> x = sp.random(1000, 1000, density=0.01) ``` Next,...
In some cases (I haven't been able to find a pattern for this), the library can fail with memory corruption. I am able to get this consistently with the following...
I've noticed that downloading the raw data and running the provided R scripts for the data sets to generate the RDS files outputs different results than what the ones on...
Hi, first of all, thanks for the interesting work and useful package. I've been playing around with this in Seurat and have found it immensely useful. However, my primary environment...
@dkobak @ivirshup @Koncopd This is a first stab #1233. Features - [X] Construct t-SNE embeddings - [ ] Recipes - [ ] Ingest functionality As discussed, this PR currently implements...
Hi, I'm having some trouble installing KDEpy on my M1 mac. I've included the install log below. I've seen on pip that you don't provide wheels for M1 ARM processors,...
`umap-learn` uses `numba` for JIT. This is fine for making the code run fast, however, this also makes distributing the `umap-learn` package a pain in other open-source software. We are...
I have installed R in a conda environment and have made sure to also install the HDF5 package. I did this because I don't permission to install system-wide packages, and...
**version** master (67c10bd) **Expected behavior** I connect the widget to any data, set the "Gene Sets" selection to "CellMarker" and select a couple of different rows. Now I find that...