Parashar
Parashar
The problem got fixed when using older version of Delphi. Probably the output of Delphi 7 is not what Biskit looks for and treats it as error.
Hi, Yeah. Sure. It will be nice to have multi architecture built for SG-tSNE. I will try to create one on conda. Will keep you posted about this.
Yes indeed, I'm looking for an out-of-core fit method and I'm sure that it would be of interest to many. Pardon me if this is a very naive suggestion but...
Hi, For point 2: Version `0.19.1` is out now. This version contains the parameter `title` in the `plot_layout` function. This will allow you to set cutom titles for your plots....
I'll keep this issue open until we have fixed the rest of the issues.
Hi @melancholy12 Sorry for the slow reply on this. You see, this functionality doesn't exist in Scarf, but we did provide the function to draw in the code that accompanied...
Hi @alimanfoo and Zarr developers, First of all, thank you for developing, maintaining and consistently improving this incredible software. We have created a memory efficient single-cell genomics data processing toolkit,...
Thanks for the reply, Ben! I'd be happy to chip in. I can try to "transpile" your Scanpy scripts into Scarf equivalent. If that works, then it should be plug-and-play...
@KSimi7 There might be an upstream issue with the sknetwork package. Have you tried Leiden clustering? `ds.run_leiden_clustering`
I usually define a convenience function in a logger config file and then use it as needed across the code base: ```python def get_tagged_logfire(tags: list[str] | None = None) ->...