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Results 2 issues of


                                            pannoniac

fasta file not processed by colabfold_batch when using local mmseq2 server

Assumption: Databases not indexed correctly or naming mismatch. Input /apps/prod/COMPCHEM/colabfold/git/ColabFold/MsaServer/databases/uniref30_2103 does not exist -> ? Input /apps/prod/COMPCHEM/colabfold/git/ColabFold/MsaServer/databases/uniref30_2103.idx does not exist -> a file called "uniref30_2103_db.idx" exists ## Expected Behavior fasta...

Observation and Fix: Sqlalchemy 2.0 Compatibility - Downgrade to Sqlalchemy 1.x

Just for information and to help other users of Biophi: I installed Biophi using miniforge by following instructions provided on the project's github page. However there was a runtime error:...